Package: BeastJar
Type: Package
Title: JAR Dependency for MCMC Using 'BEAST'
Version: 10.5.1
Authors@R: c(
    person("Marc A.", "Suchard", email = "msuchard@ucla.edu", role = c("aut","cre","cph")),
    person("Andrew", "Rambaut", role = "cph"),
    person("Alexei J.", "Drummond", role = "cph")
    )
Description: Provides JAR to perform Markov chain Monte Carlo (MCMC)
        inference using the popular Bayesian Evolutionary Analysis by
        Sampling Trees 'BEAST X' software library of Baele et al (2025)
        <doi:10.1038/s41592-025-02751-x>. 'BEAST X' supports
        auto-tuning Metropolis-Hastings, slice, Hamiltonian Monte Carlo
        and Sequential Monte Carlo sampling for a large variety of
        composable standard and phylogenetic statistical models using
        high performance computing.  By placing the 'BEAST X' JAR in
        this package, we offer an efficient distribution system for
        'BEAST X' use by other R packages using CRAN.
License: Apache License 2.0
Encoding: UTF-8
Depends: R (>= 3.5.0)
Imports: rJava
URL: https://github.com/beast-dev/BeastJar
Copyright: See file COPYRIGHTS
RoxygenNote: 7.3.2
SystemRequirements: Java (>= 1.8)
Suggests: testthat
Language: en-US
Config/pak/sysreqs: make default-jdk
Repository: https://beast-dev.r-universe.dev
Date/Publication: 2025-07-20 16:12:34 UTC
RemoteUrl: https://github.com/beast-dev/beastjar
RemoteRef: HEAD
RemoteSha: 0cbaee7d669ad0fab7b8f36eba5b62772c1cc390
NeedsCompilation: no
Packaged: 2026-06-21 08:43:09 UTC; root
Author: Marc A. Suchard [aut, cre, cph],
  Andrew Rambaut [cph],
  Alexei J. Drummond [cph]
Maintainer: Marc A. Suchard <msuchard@ucla.edu>